Here we list important information on PTGL updates, planned maintenance times, and more.
We are currently running an update to the latest PDB version on our cluster. The update will be rolled out to the PTGL server in December. This update will add support for complex graphs and ligand-centered graphs.
We have published a paper on the new PTGL in Oxford Bioinformatics. Read it at oxfordjournals.org.
The code of VPLG, the command line application which computes all the data in the PTGL database, has been moved to GitHub. The project page and the VPLG releases will stay at SourceForge though, so this only affects developers and people interested in the source code.
The PTGL now has a twitter account, and you can stay up-to-date by following @vplg_project.
The PTGL has been updated to PDB data from May 2015, and is now online again. Enjoy.